selected publications
-
academic article
- Abstract, link, publish, exploit: An end to end framework for workflow sharing. Future generations computer systems : FGCS. 2017
- An ontology for videogame interoperability. Multimedia tools and applications. 2016
- Using a suite of ontologies for preserving workflow-centric research objects. Web semantics (Online). 32:16-42. 2015
- Common motifs in scientific workflows: An empirical analysis. Future generations computer systems : FGCS. 36:338-351. 2014
- Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome. PLoS ONE. 8:e80278. 2013
- Transforming meteorological data into Linked Data. Semantic web. 4:285-290.
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article
-
chapter
- Challenges for Provenance Analytics Over Geospatial Data. Lecture Notes in Computer Science. 261-263. 2015
- From Preserving Data to Preserving Research: Curation of Process and Context. Research and Advanced Technology for Digital Libraries. 490-491. 2013
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conference paper
- LDP4ROs 2015
- FragFlow Automated Fragment Detection in Scientific Workflows 2014
- Towards Workflow Ecosystems through Semantic and Standard Representations 2014
- Workflow Reuse in Practice: A Study of Neuroimaging Pipeline Users 2014
- A workflow PROV-corpus based on taverna and wings 2013
- Detecting common scientific workflow fragments using templates and execution provenance 2013
- On specifying and sharing scientific workflow optimization results using research objects 2013
- Common motifs in scientific workflows: An empirical analysis 2012
- A new approach for publishing workflows 2011
- A provenance-aware Linked Data application for trip management and organization 2011
-
dataset
- Checklist for a Workflow Conservation Plan
- Checklist for a Workflow Conservation Plan
- Checklist for a Workflow Conservation Plan
- Corpus WC1 from the LONI Pipeline
- Corpus WC1 from the LONI Pipeline
- Corpus WC3 from The LONI Pipeline
- Corpus WC4 from the LONI Pipeline
- Drug Binding site file
- Drug Binding site file
- Drug key file
- Drug key file
- FragFlow evaluation for Wings corpus
- Highly connected drug file
- Homology Model list
- Homology model file
- How to (properly) publish a vocabulary or ontology in the web
- Non relevant results
- Results of the FragFlow evaluation performed on the LONI Pipeline
- Results of the FragFlow evaluation performed on the LONI Pipeline
- SMAP configuration file
- SMAP configuration file
- Solved structures file
- Solved structures list
- TB Protein information file
- TB Protein information file
- TB-Drugome
- Template PDB file
- Template PDB file
- The LONI Pipeline. Survey information on FragFlow fragment usefulness
- The LONI Pipeline. Survey information on FragFlow fragment usefulness
- The LONI Pipeline. Survey information on FragFlow fragment usefulness
- User evaluations from the LONI Pipeline
- Visualization of highly connected drugs